| Field Name | Format | Description |
|---|---|---|
| PATIENT | Character or Numeric | *Required Code to identify patient (Cohort Patient ID) |
| TEST_ID | Character or Numeric | *Required A unique identifier linking this record to tblLAB_RES_LVL_2 and tblLAB_RES_LVL_3 |
| SAMPLE_D | YYYY-MM-DD | *Required Date of the actual sample taken (NOT the test date) |
| SAMPLE_D_A | Character < = Before this date D = Exact to the date M = Exact to the month Y = Exact to the year > = After the date U = Unknown | Date approximation for SAMPLE_D |
| SEQ_DT | YYYY-MM-DD hh:mm | Date and time when the sequencing was performed |
| LAB | Character | Name of laboratory where the test was performed |
| LIBRARY | Character | Library/algorithm used to identify resistance mutations |
| REFSEQ | Character | Name/identifier of reference strain used to find mutations |
| KIT | Character | Vendor and version/name of the kit used for the test |
| SOFTWARE | Character | Software and version used to determine resistance |
| TESTTYPE | Numeric 1 = Genotype (e.g., GeneXpert, NAAT/LPA) 2 = Phenotype (e.g., culture) 9 = Other | Type of test |
| PATHOGENTYPE | Numeric | Type of pathogen Use character string from MeSH terminology: https://meshb.nlm.nih.gov/#/fieldSearch |
| VIRUSTYPE | Numeric 1 = HIV 2 = HCV | Type of virus |
| SUBTYPE | Character | Subtype of HIV- or HCV-RNA |